Phenotypic Characterization of Fungal Pathogens Associated with the Main Mycoses of Cashew (Anacardium occidentale L.)

Aims: To study the diversity of fungal pathogens associated with cashew mycoses in Togo. Study Design: This research project was initiated by the Mycology Research and Applications Unit of the Botany and Plant Ecology Laboratory (LBEV) in order to have adequate information on cashew mycoses in Togo. Place and Duration of Study: Laboratory of Botany and Plant Ecology (LBEV) of the University of Lome (UL) and of Crop Protection and Biosafety Laboratory of Togolese Institute of Agronomic Research (ITRA), February to August 2020. Methodology: A total of 148 symptomatic samples (leaves, buds, inflorescences, nuts, and apples) were collected from cashew trees in the East Mono prefecture of Togo. Malt-agar medium supplemented with chloramphenicol at 0.5 g/l was used for the isolation of fungal pathogens. The characterization of these fungal pathogens was carried out from the 7th day based on their macroscopic (texture, color, diameter of growth) and microscopic (hypha, spore, fruiting body) characters. Results: This study revealed the presence of five mycoses in cashew orchards in the East Mono prefecture. These are leaf anthracnose, bud’s dieback, black rust, leaf yellowing, and powdery mildew. In total, 12 fungal genera were encountered and 14 species of fungal pathogens were identified on all the samples collected: Rhizopus sp., Penicillium sp., Mucor sp., Sporotrichum sp., Fusarium nivale, Fusarium moliniforme, Fusarium moliniforme var. subglutinans, Curvularia lunata, Curvularia geneculata, Alternaria tenuissima, Alternaria brassicisola, Beltrania rhombica Penz., Thielavia coactilis Nicot, Helminthosporium avenae, Helminthosporium siccans, Phoma eupyrena, Aspergillus flavus, Aspergillus niger. Conclusion: It would be of great interest to train cashew producers in the East Mono prefecture on the recognition of the symptoms of these mycoses and their management.

Caracterización fenotípica de variantes pequeñas de Staphylococcus aureus: un nuevo desafío / Phenotypic characterization of small colony variants of Staphylococcus aureus: a new challenge / Caracterizaçao fenotípica de pequenas variantes de Staphylococcus aureus: um novo desafio

En infecciones crónicas y recurrentes por Staphylococcus aureus se han descripto subpoblaciones de colonias pequeñas (VCPSa). El objetivo de este trabajo fue reconocer las características fenotípicas de VCPSa para optimizar su detección y caracterización a partir de materiales clínicos provenientes de infecciones crónicas. Se analizaron n=3 VCPSa de pacientes adultos con infecciones crónicas de tejidos blandos. Las muestras se inocularon en agar nutritivo, agar sangre, agar chocolate y agar Schaedler suplementado. Se realizaron tinción de Gram, catalasa, coagulasa libre, pruebas de dependencia para hemina, menadiona y timidina y, desarrollo/ataque del manitol en agar manitol salado. La sensibilidad antibiótica se efectuó en agar Mueller Hinton suplementado, según las pruebas de dependencia. Se investigó la presencia de proteína ligadora de penicilina anómala (PBP2´) por aglutinación con látex. Las VCPSa se detectaron en los medios de cultivo enriquecidos. Estas bacterias dieron positivas las pruebas de catalasa y coagulasa, y eran dependientes de menadiona y hemina. En los tres aislamientos se observó resistencia a cefoxitina y se detectó la PBP2´.

In chronic and recurrent infections, small colonies of Staphylococcus aureus subpopulations (SCVSa) have been observed. The objective of the present study was to recognize the phenotypic characteristics of SCVSa isolated from patients with chronic infections to optimize their detection. SCVSa of adult patients n=3 with chronic soft tissue infections were analyzed. Samples were inoculated on nutritive agar, blood-agar, chocolate agar and supplemented Schaedler agar. Subsequently, Gram stain, catalase, free coagulase, dependence tests for hemin, menadione and thymidine, and growth/fermentation of mannitol on salt mannitol agar were performed. Antibiotic susceptibility tests were performed by the agar diffusion method on supplemented Mueller Hinton agar, according to dependence assays results. Anomalous penicillin binding protein (PBP2') was investigated by latex agglutination. SCVSa were detected in all enriched culture media. They showed catalase and coagulase activities, and menadione and hemin dependence. By the agar diffusion test, cefoxitin resistance was found in all isolates; PBP2' was detected as well.

Nas infecções crônicas e recorrentes por Staphylococcus aureus, subpopulações de pequenas colônias (VCPSa) foram descritas. O objetivo desse trabalho foi reconhecer as características fenotípicas de VCPSa para otimizar sua detecção e caracterização a partir de materiais clínicos provenientes de infecções crônicas. Foram analisados n=3 VCPSa de pacientes adultos com infecções crônicas de tecidos moles. As amostras foram inoculadas em agar nutritivo, agar sangue; agar chocolate e agar Schaedler enriquecido. Foram realizados testes de coloração de Gram, catalase, coagulase livre, testes de dependência para hemina, menadiona e timidina, e desenvolvimento/fermentação do manitol em agar manitol salgado. A sensibilidade antibiótica foi realizada em agar Mueller Hinton suplementado, de acordo com os testes de dependência. Foi investigada a presença de proteína ligante de penicilina anômala (PBP2´) por aglutinação com látex. Os VCPSa foram detectados em meios de cultura enriquecidos. Estas bactérias deram positivas nos testes de catalase e coagulase positivos e eram dependentes de menadiona e hemina. A resistência à cefoxitina foi detectada nos três isolados e detectou-se a PBP2'.

Genetic diversity of Gossypium barbadense from the central Brazilian Amazon / Diversidade genética de Gossypium barbadense coletado na Amazônia central

ABSTRACT The Amazon Basin is a center of diversity of Gossypium barbadense and the strategy for conservation of this genetic resource depends on the knowledge of the diversity maintained in Amazonas State. During two expeditions, in 2012 and 2014, plants were collected in ten municipalities in the state of Amazonas, in the central Brazilian Amazon region. The molecular diversity was estimated by SSR markers for 50 samples collected in 2012. The morphological diversity of 24 plants collected in 2014 was assessed ex situ and compared to that of 50 plants of the same and other cotton varieties from other Brazilian states. Most of plants evaluated in situ in Amazonas had purple petioles and veins (82%), associated to medicinal use, and kidney seeds (78%). The ex situ morphological analysies showed that G. barbadense plants from the Amazonas state: i) presented higher similarity to cotton plants from other northern Brazilian states, and ii) were grouped separately from those of other northern Brazilian states by descriptor analysis. Both the molecular (H=0.41) and morphological (H=0.38±0.02) diversity among the collected plants was considered intermediary. Our study indicates the distinctiveness of Amazon cottons, and contributes to demonstrate the discrimination power of multicategorical traits.

RESUMO A bacia Amazônica é um centro de diversidade de Gossypium barbadense e a estratégia de manutenção desse recurso genético depende do conhecimento da diversidade da espécie mantida no Estado do Amazonas. Em 2012 e 2014 plantas desta espécie foram coletadas em dez municípios na região centro-leste do Estado. A diversidade molecular por marcadores microssatélites foi mensurada para 50 amostras da coleta de 2012. A diversidade morfológica de 24 plantas coletadas em 2014 foi medida ex situ e comparada com a de 50 amostras desta e de outras variedades de algodão de outros estados do Brasil. A maioria das plantas do Amazonas apresentou folhas arroxeadas (82%), associadas a uso medicinal, e sementes unidas, do tipo rim-de-boi (78%). A análise morfológica ex situ mostrou que G. barbadense coletado no estado do Amazonas: i) tem maior similaridade com plantas da mesma espécie de outros estados da Região Norte do Brasil e ii) se agrupam entre si de forma diferenciada das plantas de outros estados. A diversidade molecular (H = 0,41) e morfológica (H = 0,38 ± 0,02) entre os acessos foi considerada intermediária. Nosso estudo indica o caráter distintivo dos algodões amazônicos, e contribui para demonstrar o poder de discriminação de variáveis multicategóricas.

Rat dental pulp stem cells: isolation and phenotypic characterization method aiming bone tissue bioengineering

ABSTRACT: Dental pulp stem cells (DPSC) have been showing a considerable potential for regenerative medicine. Pulps were collected from lower incisors (n=2) through direct access of the tooth pulp chamber. The isolated cells were cultured in alfa-MEM 10% FBS, in standard culture conditions. At the third passage, DPSC were characterized by flow cytometry (MHCI, CD54, CD73, CD90, CD45, CD11 and CD34); RT-PCR for Nanog gene; and their differentiation capacity in osteogenic, adipogenic and chondrogenic cell lines. Isolated cells exhibited adhesion capacity to plastic; fusiform morphology, and 80% confluence reached in approximately 3 days. These cells have also revealed positive expression for CD54, CD73 and CD90 markers; and negative expression for CD11, CD34 and CD45. Nanog expression was detected by RT-PCR, expected for a mesenchymal stem cell profile. DPSC chondrogenic differentiation was confirmed by positive staining in Alcian Blue; lipidic droplets stained with oil red confirmed their capacity to differentiate in adipogenic fate; while mineralized beads, stained with alizarin red, confirmed their differentiation in osteogenic phenotype. These results indicate the viability of the isolation and expansion of rat DPSC following this method, and osteogenic differentiation potential opens new perspectives for in vivo studies and the use of these cells in cellular therapies and tissue bioengineering, aiming bone repair.

Occurrence and diversity of Ralstonia solanacearum populations in Brazil / Ocorrência e diversidade de populações de Ralstonia solanacearum no Brasil

Ralstonia solanacearum is a gram-negative soil-borne bacterium capable of infection of hundreds of vegetable species over more than 50 botanical families, causing bacterial wilt, except for bananas, when the disease is called Moko. It deserves special attention, from all other plant pathogenic bacteria, for its high phenotypic and genotypic plasticity, a characteristic that makes disease control extremely difficult. In this context, frequent and necessary surveys are conduct in the attempt of characterizing the prevailing strains of R. solanacearum in each region where the disease has been reported. However, knowledge about occurrence and diversity of R. solanacearum in Brazil is fragmented and in some cases, based on inconclusive studies with few strains, little representative of a given region. The need to obtain a greater picture guided this review. The occurrence of this bacterium in Brazilian States and the possible causes for its dissemination are presented, with emphasis on studies of genetic variability of populations of R. solanacearum in the country. The compiled results report a wide distribution of the bacterium in Brazil and great variability of its populations among locations. Partly due to the difficulty of detecting small titer of bacteria in samples, paucity of information about the origin of inoculum in certain regions is observed, as well as the need for detecting the presence of the pathogen in asymptomatic plants, potato tubers with latent infections, soil, and water, which are the major causes of bacterial dissemination into areas without any disease history.

Ralstonia solanacearum é uma bactéria gram-negativa habitante do solo capaz de infectar centenas de espécies vegetais distribuídas em mais de 50 famílias botânicas, onde causa a murcha-bacteriana, exceto na bananeira, na qual recebe o nome de Moko. Destaca-se entre outras bactérias fitopatogênicas pela sua alta plasticidade fenotípica e genotípica, característica que contribui sobremaneira para dificultar o controle da doença. Nesse contexto, levantamentos frequentes e necessários são conduzidos na tentativa de caracterizar isolados de R. solanacearum prevalentes em cada região onde a doença tem sido relatada. No Brasil, o conhecimento sobre a ocorrência e a variabilidade de R. solanacearum está fragmentado e, em alguns casos, baseado em estudos inconclusivos pelo uso de amostras de isolados pouco representativas de uma região. A necessidade de agrupar essas informações norteou a presente revisão de literatura. A ocorrência da bactéria nos Estados brasileiros e as possíveis causas de sua disseminação são apresentadas, com ênfase nos estudos da variabilidade genética das populações de R. solanacearum no país de acordo com o atual esquema de classificação da bactéria. Os resultados de pesquisa compilados da literatura reportam ampla distribuição da bactéria no Brasil e grande variabilidade de suas populações entre locais. Em parte devido à dificuldade de detectar pequenos números de células bacterianas em amostras, nota-se escassez de informações sobre a origem do inóculo em determinadas regiões, bem como a necessidade de detectar a presença do patógeno em plantas assintomáticas, em tubérculos de batata com infecções latentes, no solo e na água, que são as principais causas da disseminação da bactéria para áreas sem histórico da doença.

Caracterización fenotípica de células madre mesenquimales humanas de médula ósea y tejido adiposo. Resultados preliminares / Phenotypic characterization of mesenchymal human stem cell from bone marrow and adipose tissue. preliminary results

Introducción:las células madre mesenquimales (CMM) poseen características fenotípicas y funcionales que les confieren un amplio potencial terapéutico por su posible uso en la terapia celular regenerativa, en el rechazo del trasplante alogénico y en enfermedades inflamatorias crónicas. Objetivo: evaluar la expresión de moléculas de membrana que permiten identificar la expresión de patrones moleculares característicos de CMM humanas mantenidas en cultivo. Métodos: se estudió la expresión fenotípica de células mononucleares procedentes de médula ósea obtenidas mediante aspiración medular, separadas por gradiente de Ficoll y cultivadas ex vivo entre los pases o subcultivos 3 y 16; y adipocitos cultivados procedentes de la extracción enzimática de tejido adiposo de donantes sanos. Se realizó doble marcaje para las moléculas CD34/CD45, CD34/CD90, CD34/CD117, y CD34/CD44. Resultados: en los resultados preliminares obtenidos se observó que las células cultivadas procedentes de médula ósea, entre los pases 4 y 8 de cultivo expresaron 45,13 por ciento de células CD34-/CD45- (doblemente negativas), lo que correspondió con el 25,24 por ciento de células CD34-/CD90+ y el 96,90 por ciento de CD34-/CD117-. En las células procedentes de cultivo de adipocitos se observó el 52,3 por ciento de CD34-/CD45- (doblemente negativas),12,31 por ciento de CD34-/CD90+,43,31 por ciento de CD34-/CD117- y 64,68 por ciento de CD34-/CD44+.Estos resultados sugieren que ambos cultivos se diferenciaron a CMM. Las CMM procedentes de adipocitos mostraron el 64,68 por ciento de células con expresión de la molécula de adhesión CD44 a la que se atribuyen propiedades funcionalescomo el asentamiento tisular. Conclusiones: estos resultados preliminares permiten corroborar que ambos métodos experimentales de cultivo son efectivos para la obtención de CMM con fines terapéuticos

Introduction:mesenchymal stem cells (MSCs) have phenotypic and functional characteristics whichgives them a broad therapeutic potential for possible use in regenerative cell therapy, allogeneic transplant rejection and chronic inflammatory diseases. Objective: to evaluate the expression of moleculemembranes expression to identify molecular patterns characteristic of human MSCs maintained in culture. Methods:the phenotypic expression of mononuclear cells from bone marrow wereobtained by bone marrow aspiration, separated by Ficoll and cultured ex vivo between passages or subcultures 3 and 16 and adipocytes cultured obtained from enzyme extraction of adipose tissue of healthy donor. Double staining was performed for molecules CD34/CD45, CD34/CD90, CD34/CD117 and CD34/CD44. Results:preliminary results showed that cultured mononuclear cells from bone marrow between passage 4 and 8 of culture expressed 45,13 percent CD34-/CD45- cells (double-negative), corresponding to 25,24 percent CD34-/CD90+ cells and 96,90 percent of CD34-/CD117-. Adipocytes from culture cells showed 52,3 percent CD34-/CD45- (double-negative), 12,31 percent cells CD34-/CD90+, 43,31 percent CD34-/CD117- (double-negative). Our results suggest that both cultures were differentiated to MSCs. Adipocytes from MSCs showed 64,68 percent of cells with expression of CD44 adhesion molecule conferring functional homing properties Conclusions:these preliminary results corroborate that the experimental methods used in cultivation are effective for obtaining MSCs with therapeutic purposes

Isolation and characterization of lactic acid bacteria and yeasts from the Brazilian grape sourdough

Sourdough is a mixture of flour and water fermented by lactic acid bacteria and yeast, with a large use in bakery products. This study was developed with Brazilian grape (Niagara rosada) sourdough obtained from spontaneous fermentation. The aim of this work was to characterize genotypic and phenotypically lactic acid bacteria and yeasts isolated from sourdough. The phenotypic identification for bacteria and yeasts was performed by using the kit API50CHL and 20CAUX and the genotypic characterization was performed by sequencing method. A total of four isolated strains were analyzed in this study. Two of these strains were phenotypically and genotypic identified as Lactobacillus paracasei and one as Saccharomyces cerevisiae. Another sample phenotypically identified as Candida pelliculosa did not show the same identity by sequencing. It shows the need to use phenotypic and genotypic characterization associated for the correct microorganism identification.

Fermento natural é mistura de farinha e água fermentada por bactérias láticas e leveduras, amplamente utilizada em produtos de panificação. Neste estudo desenvolveu-se um fermento natural de uva brasileira (Niagara rosada), obtido a partir de fermentação espontânea. O objetivo deste trabalho foi caracterizar fenotipicamente e genotipicamente bactérias láticas e leveduras isoladas do fermento natural de uva. A identificação fenotípica para bactéria lática e leveduras foi realizada usando os kits API50CHL e 20CAUX e a caracterização genotípica foi realizada pelo método de sequenciamento. Neste estudo, isolaram-se quatro cepas. Duas cepas foram identificadas fenotipicamente e genotipicamente como Lactobacillus paracasei e outra cepa como Saccharomyces cerevisiae. A outra amostra de levedura, identificada fenotipicamente como Candida pelliculosa, não obteve a mesma identidade com a técnica de sequenciamento. Isso mostra a necessidade do uso da caracterização fenotípica e genotípica em associação para a correta identificação do micro-organismo.

Phenotypic profiles and detection of target genes by PCR in isolates from different sources and reference strains, identified as Cronobacter spp. (Enterobacter sakazakii)

Cronobacter, formerly known as Enterobacter sakazakii, is a novel genus of the Enterobacteriaceae family recognized as a cause of high number of fatal cases in neonates, after consuming infant formula. The conventional methods for detecting these organisms are time-consuming and lack sensitivity. The ISO/TS 22964:2006 is the most recently standardized methodology for detecting Cronobacter in powderedinfant formula. This study aimed at confirming the Brazilian isolates previously identified as E. sakazakiias Cronobacter spp. by biochemical assays, and also to compare characteristics of 37 Cronobacter andnon-Cronobacter isolates; and the miniaturized kits and the ISO/TS methodology were evaluated. A conventional PCR protocol targeting dna G was also developed and a previously described gluA targeting protocol was used. The majority of the Brazilian isolates were not confirmed as Cronobacter spp., and the selective enrichment step of ISO/TS methodology was inhibitory to some Cronobacter strains. The ID 32 Ewas the most reliable kit. The PCR protocol targeting gluA showed consistent results with ID 32E and the developed dnaG PCR protocol was 100% sensitive and specific. Thus, the PCR protocols targeting gluA and dnaG might be used to complement the Cronobacter spp. detection or identification after performing the conventional isolation and identification methods.

Caracterización fenotípica y genotípica de doce rizobios aislados de diversas regiones geográficas de Venezuela

Phenotypic and genotypic characterization of twelve rhizobial isolates from different regions of Venezuela. Rhizobial taxonomy and systematics have progressed substantially, nevertheless, few studies have been developed on venezuelan species. This study evaluated the phenotypic and genetic variation between 12 venezuelan indigenous rhizobial isolates and 10 international referential strains, by phenotypical traits and DNA molecular markers. In this regard, a PCR-RFLP of the 16S rDNA gene, the presence of large plasmids, metabolic assays in solid media, salinity resistance, pH and temperature growth conditions, and intrinsic antibiotic resistance were assayed. In reference to the phenotypic attributes, we recognized three main groups: A group I, which comprised all the strains metabolizing between 67.5%-90% of the C and N sources. They were also acid-tolerant, as well as acid producers, capable of growing at 40ºC and in high salinity conditions (2-2.5% NaCl). With regard to the antibiotic sensitivity, this group was susceptible to a 30% of the antibiotic assayed. Strains belonging to Group II exhibited a lower salt tolerance (0.1-1.5%NaCl), as well as a lower acid tolerance, since they grew well at pH values equal or higher than 5.0. This group appeared to be resistant to all of the antibiotics assayed and only metabolized between 52.5%-82.5% of the C and N sources. Group III was represented by a single bacterial strain: it has a extremely low salt tolerance (0.1% NaCl). This strain grew at a pH equal or higher than 5.6, was susceptible to 50% of the antibiotics assayed and metabolized 72% of the C and N sources. On the basis of a PCR- RFLP of the 16S rDNA, three groups were also obtained. Members of the group A showed a close resemblance to Rhizobium tropici CIAT 899 and Sinorhizobium americanum CFN-EI 156, while Group B was closely related to Bradyrhizobium spp. Group C, was also represented by only one isolate. The Trebol isolate, was the only one strain able to form nodules and does not appear to be related to any of the referential rhizobial strains, suggesting a possible symbiotic horizontal gene transfer. Finally, in this work, there are evidences of a genetic diversity in the venezuelan rhizobial strains. A different geographical origin is perhaps an important factor affecting the diversity of the indigenous rhizobia in this study. Rev. Biol. Trop. 59 (3): 1017-1036. Epub 2011 September 01.

Rasgos fenotípicos y marcadores moleculares de ADN se utilizaron para investigar la variación fenotípica y genética entre 12 aislados rizobianos venezolanos y 10 cepas de referencia internacionales. Para ello, se realizó un PCR-RFLP del gen rDNA 16S, la presencia de plásmidos grandes, análisis metabólicos en medios sólidos, resistencia a la salinidad, condiciones del crecimiento a diferentes pH y temperaturas y la resistencia intrínseca a antibióticos. En referencia a las cualidades fenotípicas, se diferenciaron tres grupos principales, un grupo I que abarcó a todas aquellas cepas que metabolizaban entre 67.5% y 90% de las fuentes de C y de N. También eran tolerantes a la acidez y productoras de ácido, capaces de crecer a 40ºC y a altas condiciones de salinidad (NaCl 2-2.5%). Con respecto a la sensibilidad a antibióticos, este grupo era susceptible a un 30% de los antibióticos empleados. Las cepas que pertenecen al grupo II exhibieron una tolerancia salina más baja (0.1- 1.5%NaCl), así como una menor tolerancia a la acidez, puesto que crecieron bien en valores de pH iguales o mayores a 5.0. Este grupo era resistente a todos los antibióticos probados y metabolizaban solamente entre 52.5%-82.5% de las fuentes de C y de N. Una sola cepa bacteriana representó al grupo III, con una baja tolerancia salina (0.1% NaCl). Este aislado creció a un pH mayor o igual a 5.6, era susceptible a 50% de los antibióticos probados y metabolizó el 72% de las fuentes de C y de N. Al tener como base el PCR-RFLP del 16S rDNA, se diferenciaron también tres grupos. Los miembros del grupo A demostraron una estrecha relación con Rhizobium tropici CiAT 899 y Sinorhizobium americanum CFN-Ei156, mientras que el grupo B está estrechamente vinculado a Bradyrhizobium spp. El grupo C, está representado por solo un aislado. El aislado Trebol, fue la única cepa capaz de formar nódulos y no aparece relacionado con ninguna cepa de referencia, y sugiere una transferencia horizontal de genes simbióticos. Finalmente, en este trabajo se evidencia una diversidad genética en las cepas rizobianas venezolanas. El origen geográfico diverso de estas cepas, quizás sea un factor importante que influencie la diversidad de los rizobios indígenas utilizados en este estudio.

Perfil fenotípico e susceptibilidade antimicrobiana de Streptococcus equi isolados de equinos da região Sul do Brasil / Phenotypic profile and antimicrobial susceptibility of Streptococcus equi isolated from horses in southern Brazil

As características fenotípicas [morfológicas, bioquímicas, susceptibilidade aos antimicrobianos, índice de resistência múltipla aos antimicrobianos (IRMA), concentração inibitória mínima (CIM) e concentração bactericida mínima (CBM) da benzilpenicilina] de 38 isolados de Streptococcus equi oriundos de amostras clínicas de animais com adenite equina foram alvo deste estudo. A fenotipia demonstrou três padrões de colônias, três biotipos de fermentação de carboidratos e variação de 0 a 0,4 no IRMA. Todos os isolados de S. equi demonstraram sensibilidade à penicilina, tanto pelo método de disco difusão quanto pelo método de microdiluição. A CIM e CBM média de benzilpenicilina foi de 0,0095μg/mL e 0,0267μg/mL para S. equi subesp. equi e de 0,0128μg/mL e 0,0380μg/mL para S. equi subesp. zooepidemicus. Os valores de CIM e CBM diferiram entre as subespécies (p<0,05). O diâmetro do halo de inibição de penicilina demonstrou relação com a CIM (ì=0,03638 - 0,00072x) para S. equi subesp. equi. Também foi demonstrada relação entre o diâmetro do halo de inibição de penicilina com a CBM para S. equi subesp. equi (ì=0,10931- 0,00223x). Entretanto para as amostras de S. equi subesp. zooepidemicus esta relação somente foi verificada para a CBM (ì=0,1322 - 0,00271x). A CIM de benzilpenicilina frente às amostras isoladas da região Central, Planalto e Sul do estado do Rio Grande do Sul foram estatisticamente semelhantes, mas diferiram do isolado do estado do Paraná, sugerindo o caráter atípico desta cepa. Todos os isolados de S. equi são sensíveis à penicilina e sulfazotrim, confirmando a eleição destes antimicrobianos para o tratamento das infecções por este agente na clínica veterinária. Os resultados obtidos não dispensam a utilização prudente dos antimicrobianos.

Phenotypic characteristics [morphology, biochemical fermentation, antimicrobial susceptibility, index of multiple resistances to antimicrobials (IMRA), minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) of benzilpenicillin] of 38 Streptococcus equi isolates from clinical samples of horses with strangles were the aim of this study. The phenotypic analyses demonstrated three colony patterns, three carbohydrate fermentation biotypes and IMRA variation from 0 to 0.4. All the isolates of S. equi demonstrated sensitivity to penicillin, both by the disc diffusion method and microdilution method. The average MIC and MBC for benzilpenincillin were of 0.0095μg/mL and 0.0267μg/mL for S. equi subsp. equi and of 0.0128μg/mL and 0.0380μg/mL for S. equi subsp. zooepidemicus. The values of MIC and MBC differed between the subspecies (p<0.05). The diameter of penicillin inhibition halo demonstrated a relation with the MIC (ì=0.03638 - 0.00072x) for Streptococcus equi subsp. equi. A relation between the diameter of the inhibition halo of penincillin was also observed with the MBC for S. equi subsp. equi (ì=0.10931 - 0.00223x). However for the samples of S. equi subsp. zooepidemicus this relation was only verified with the MBC (ì=0.1322 - 0.00271x). The MIC of benzilpenicillin of the samples isolated from the Central, Planalto and South regions of Rio Grande do Sul were statistically similar, although different from the Paraná state sample, suggesting the atypical character of this strain. All the S. equi isolates are sensitive to penicillin and sulfazotrim, confirming these as antibiotics of choice for the treatment of infections caused by this agent in the clinical veterinary practice. The results obtained do not discard the prudent use of antimicrobials.

Caracterización fenotípica y molecular de cepas de Pasteurella multocida aisladas de exudado nasal de bovinos, en dos cuencas lecheras de México / Phenotypic and molecular strain characterization of Pasteurella multocida isolated from cattle nasal exudate from two dairy complexes in Mexico

Two hundred and fifty strains of P. multocida isolated from nasal exudate were obtained, 182 clinically healthy bovine strains and 68 clinically ill with pneumonia bovine strains, from two dairy complexes, one in the Tizayuca region of Hidalgo state (n = 81), and another in the Region Lagunera of the states of Coahuila and Durango (n = 169), Mexico. Strains were identifed by conventional biochemical tests and API 20NE commercial system. Capsular typing was performed by testing hyauloronidase and acrifavine, as well as by a multiplex PCR for amplification of genes hyaC-hyaD and dcbF. The overall results of hyaluronidase by the test showed that 90.4% (226/250) of the strains were capsular type A and through the acrifavine test 9.6% (24/250) was capsular type D. Using the multiplex PCR, 92% (230/250) was capsular type A and 8% (20/250) was capsular type D. The comparison of results between biochemical tests and PCR are consistent in identifying strains of capsular type A but not with the capsular type D. It was possible to confrm that capsular type A of P. multocida is predominat in Mexico.

Se obtuvieron 250 cepas de P. multocida aisladas de exudado nasal, 182 cepas de bovinos clínicamente sanos y 68 cepas de bovinos clínicamente enfermos de neumonía, de dos complejos lecheros, uno en la región de Tizayuca estado de Hidalgo (n = 81), y otro en la Región Lagunera de los estados de Coahuila y Durango (n = 169), México. Las cepas fueron identificadas mediante pruebas bioquímicas convencionales y el sistema comercial API 20NE. La tipificación capsular se realizó por medio de las pruebas de hiauloronidasa y acrifavina, así como por medio de una PCR múltiple para la amplificación de los genes hyaD-hyaC y dcbF. Los resultados globales mediante la prueba de hialuronidasa mostraron que 90.4% (226/250) de las cepas fueron del tipo capsular A y por medio de la prueba de acrifavina, 9.6% (24/250) fue del tipo capsular D. Por medio de la PCR múltiple, 92% (230/250) fue tipo capsular A y 8% (20/250) fue tipo capsular D. La comparación de los resultados entre las pruebas bioquímicas y la técnica de PCR concuerdan en la identificación de las cepas del tipo capsular A, pero no así con las del tipo capsular D. Se corrobora que en México el tipo capsular predominante de P. multocida es el A.

Phenotypic characterization of Clostridium botulinum strains isolated from infant botulism cases in Argentina / Caracterización fenotípica de cepas de Clostridium botulinum aisladas de casos de botulismo del lactante en Argentina

Infant botulism is the most common form of human botulism; however, its transmission has not been completely explained yet. Some of the most recognized potential sources of Clostridium botulinum spores are the soil, dust, honey and medicinal herbs. In Argentina, 456 cases of infant botulism were reported between 1982 and 2007. C. botulinum type A was identified in 455 of these cases whereas type B was identified in just one case. However, in Argentina, types A, B, E, F, G, and Af have been isolated from environmental sources. It is not clearly known if strains isolated from infant botulism cases have different characteristics from strains isolated from other sources. During this study, 46 C. botulinum strains isolated from infant botulism cases and from environmental sources were typified according to phenotypic characteristics. Biochemical tests, antimicrobial activity, and haemagglutinin-negative botulinum neurotoxin production showed uniformity among all these strains. Despite the variability observed in the botulinum neurotoxin's binding to cellular receptors, no correlation was found between these patterns and the source of the botulinum neurotoxin. However, an apparent geographical clustering was observed, since strains isolated from Argentina had similar characteristics to those isolated from Italy and Japan, but different to those isolated from the United States.

El botulismo del lactante es la forma más común del botulismo humano; sin embargo, su forma de transmisión no ha sido totalmente explicada. El suelo, el polvo ambiental, la miel y algunas hierbas medicinales son potenciales fuentes de esporas de Clostridium botulinum. Entre 1982 y 2007 se informaron en Argentina 456 casos de botulismo del lactante, 455 casos debidos al serotipo A y uno al serotipo B. Sin embargo, los serotipos A, B, E, F, G y Af han sido aislados de suelos y otras fuentes en Argentina. No se conoce si las cepas aisladas de casos de botulismo del lactante poseen características diferentes de las cepas aisladas de otras fuentes. Durante este estudio se caracterizaron 46 cepas de C. botulinum. Las pruebas bioquímicas y de sensibilidad a los antimicrobianos y la producción de neurotoxina botulínica hemaglutinina-negativa mostraron uniformidad entre estas cepas. A pesar de la variabilidad observada respecto de la unión de la neurotoxina a receptores celulares, no se observó una correlación entre estos patrones de unión y la fuente de aislamiento. Sin embargo, se observó una aparente agrupación geográfica, ya que las cepas aisladas en Argentina tuvieron características similares a las observadas en las cepas aisladas en Italia y Japón, pero diferentes de las que se registraron en las cepas aisladas en los Estados Unidos.

Caracterización fenotípica de cepas de Staphylococcus coagulasa negativa aisladas de una unidad de alto riesgo neonatal / Phenotypic characterization of coagulase-negative Staphylococcus strains isolated from a high risk neonatal unit

Las infecciones nosocomiales constituyen un problema de salud pública, debido a las altas tasas de morbimortalidad que ocasiona y por los altos costos económicos que generan. Las unidades de cuidados intensivos son una de las principales áreas donde se registra una alta incidencia de infección nosocomial, siendo la sepsis la principal infección en la cual se involucran una gran variedad de microorganismos. El grupo de Staphylococcus coagulasa negativa (SCN), es uno de los agentes etiológicos más frecuentemente aislados. De ahí nuestro interés en realizar la caracterización de 32 cepas de SCN aisladas de neonatos con infección nosocomial en la Unidad de Alto Riesgo Neonatal (UARN) del Instituto Autónomo Hospital Universitario de Los Andes (IAHULA), Mérida, Venezuela; durante el período diciembre 1997-Abril 1999. Los resultados muestran que el aislamiento de SCN fue de 47,37 por ciento. El 78,1 por ciento de las cepas estudiadas se aislaron de neonatos con bacteremia. Las especies más frecuentes fueron S. epidermidis (46,9 por ciento) y S. warneri (34,4 por ciento). Todas las cepas evaluadas mostraron resistencia a la penicilina y en un 18,8 por ciento de ellas mediada por la producción de B-lactamasa. El 68,8 por ciento de las cepas fueron resistentes a oxacilina y el 78,1 por ciento a gentamicina. La mayoría de las cepas resistentes a oxacilina mostraron valores de CIM g/mL, y se detectó la presencia de la PBP2a. Ninguna de las cepas fueron hiperproductoras de B-lactamasa. Se observó una excelente actividad de la vancomicina y quinupristin-dalfopristin sobre todas las cepas SCN evaluadas. Debido al papel que tienen los SCN en la UARN del IAHULA, es necesario extremar las medidas de asepsia durante los procedimientos de diagnóstico y terapéuticos invasivos, con el propósito de evitar las infecciones causadas por este grupo de microorganismos.

Nosocomial infections constitute a public health problem due to a high level of morbidity and mortality, generating high health-care costs in hospitals. Intensive care units are the principal areas where a high incidence of nosocomial infections is reported. Bacterimia is the principal infection involving a large variety of microorganisms; coagulase-negative Staphylococcus (CNS) is one of the most frequently isolated pathogens. Therefore, the purpose of this study was to characterize the 32 strains of CNS isolated from neonates with nosocomial infections in the High Risk Neonatal Unit (HRNU) at the University of the Andes Hospital Autonomous Institute (UAHAI), Mérida, Venezuela, from December 1997 to April 1999. Results showed that the isolation of CNS was 47.37 percent; 78.1 percent of the species were isolated from neonates with bacteremia. S. epidermidis (46.9 percent), and S. warneri (34.4 percent) were the species most frequently found. All pathogens showed resistance to penicillin and 18.8 percent of them produced ß-lactamase; 68.8 percent were resistant to oxacillin and 78.1 percent to gentamicin. Most of the oxacillin-resistant strains showed MIC values above 0.5 mg/mL and the presence of PBP2a was detected. None of the strains were hyper-producers of ß-lactamase. Vancomicin and quinuprintin/dalfopristin showed excellent activity against these CNS. Due to the role of CNS as a pathogen in the HRNU of UAHAI, strong asepsis measures during diagnosis and therapeutic invasive procedures must be taken to prevent infections caused by this group of microorganisms.